The detailed information of tRNA gene sequence


Sequence ID>W1610920123
Genome IDLSSI01000073
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 28065
End posion on genome 27989
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaagaataaa
tRNA gene sequence 
GGGCCAGTGGTCTAGTTGGTTATGACATCGCTCTCACACGGCGAAGGTCGCCGGTTCGAA
TCCGGCCTGGCCCACTA
Downstream region at tRNA end position 
ccttcttctc
Secondary structure (Cloverleaf model)
>W1610920123	Val	CAC
                   a      ACTA ccttcttctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    T       T C T G       G C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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