The detailed information of tRNA gene sequence


Sequence ID>W1610920125
Genome IDLSSI01000075
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 2404
End posion on genome 2479
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agctattctT
tRNA gene sequence 
GGGCTCGTAGCTTAGACTGGTGGAGCGACTGGCTCATAACCAGTTGGTCGTCGGTTCAAA
TCCGGCCGGGCCCATtc
Downstream region at tRNA end position 
ctttcgaatt
Secondary structure (Cloverleaf model)
>W1610920125	Met	CAT
                   T      ATtc ctttcgaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      A G A        A      | + | | |     A
    C       T T C G       G T C G G     C
    T       + | | |                 T T
    G       G A G C
      G T G        G     TGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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