The detailed information of tRNA gene sequence


Sequence ID>W1610920126
Genome IDLSSI01000085
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 8011
End posion on genome 8085
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
gataaccacT
tRNA gene sequence 
GGGCCTGTGGGGTAGCTTGGTATCCTTGTGGCTTCGGGAGCCATTGACTTGCGTTCAAAT
CGCAACAGGCCCATga
Downstream region at tRNA end position 
aatttccatt
Secondary structure (Cloverleaf model)
>W1610920126	Pseudo	CGG
                   T      ATga aatttccatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A A C G C     A
      C G A        G      | | | | |     A
    T       T G G G       T T G C G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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