The detailed information of tRNA gene sequence


Sequence ID>W1610920650
Genome IDLSTC01000081
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira sp. SCGC AG-212-E16 [LSTC]
Start position on genome 10668
End posion on genome 10745
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
attgatattt
tRNA gene sequence 
GGTCCCATCGTCTAGCCTGGCCTAGGACGGAGCCCTCTCAAGGCTTAAACACGGGTTCAA
ATCCCGTTGGGACCACCA
Downstream region at tRNA end position 
tcacttacgc
Secondary structure (Cloverleaf model)
>W1610920650	Glu	CTC
                   t      ACCA tcacttacgc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     AAAC
                    G + T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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