The detailed information of tRNA gene sequence


Sequence ID>W1610920655
Genome IDLSTC01000096
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira sp. SCGC AG-212-E16 [LSTC]
Start position on genome 10981
End posion on genome 10905
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tagagcccgt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCCGGTAGCGTACTCGCTTGGGGTGCGAGTGGTCGGCCGTTCAAA
TCGGCTCGCCCCGACCA
Downstream region at tRNA end position 
aaatatcata
Secondary structure (Cloverleaf model)
>W1610920655	Pro	GGG
                   t      ACCA aaatatcata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C G G C     A
      C G A        G      + | | | |     A
    C       C G C G       G G C C G     C
    C       | | | +                 T T
    G       G C G T
      G T A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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