The detailed information of tRNA gene sequence


Sequence ID>W1610925039
Genome IDLTAZ01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus paucihalophilus DSM 24557 [LTAZ]
Start position on genome 186659
End posion on genome 186732
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
ttccgagcgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCTCAGTTCGAAT
CTGAGCCGGCCCACtt
Downstream region at tRNA end position 
ttcgtcccgc
Secondary structure (Cloverleaf model)
>W1610925039	Pseudo	CGG
                   c      ACtt ttcgtcccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A G T C     A
      C G A        G      | | | | |     G
    T       T G G G       C T C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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