The detailed information of tRNA gene sequence


Sequence ID>W1610925042
Genome IDLTAZ01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus paucihalophilus DSM 24557 [LTAZ]
Start position on genome 710624
End posion on genome 710709
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agatcacggt
tRNA gene sequence 
GTCGTGGTAGCCAAGCGGCCTAAGGCGCAGGGTTGCTAACTCTGTGGCGTTCAGCCTCCG
GGGTTCGAATCCCCGCCACGACGCTA
Downstream region at tRNA end position 
cactaccagt
Secondary structure (Cloverleaf model)
>W1610925042	Ser	GCT
                   t      GCTA cactaccagt
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       A C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      C T A        G     TGGCGTTCAGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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