The detailed information of tRNA gene sequence


Sequence ID>W1610925045
Genome IDLTAZ01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus paucihalophilus DSM 24557 [LTAZ]
Start position on genome 701240
End posion on genome 701156
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tccgaaccga
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCCAATGCGCCTGCCTTGAGAGCAGGTGTCCGAGAGGACTCA
TGGGTTCAAATCCCATCCCCACCGCtt
Downstream region at tRNA end position 
ttccgcgagc
Secondary structure (Cloverleaf model)
>W1610925045	Ser	TGA
                   a      GCtt ttccgcgagc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       A T G G G     C
    G         | | |                 T T
    C       A T G C
      C C A        G     TGTCCGAGAGGACTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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