The detailed information of tRNA gene sequence


Sequence ID>W1610936095
Genome IDLUMY01000109
Search identical group
Phylum/ClassActinomycetota
SpeciesAcidimicrobiia bacterium REDSEA-S14_B4 [LUMY]
Start position on genome 5941
End posion on genome 6029
Amino Acid Pseudo
Anticodon GGA
Upstream region at tRNA start position 
acggggttcc
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGAATCGGCACGCCTGGAACGCGTGTGTGGCCCCTGGTCAC
CGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
tgcaatggcc
Secondary structure (Cloverleaf model)
>W1610936095	Pseudo	GGA
                   c      GCCG tgcaatggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    A       A T C G
      C G A        G     TGTGGCCCCTGGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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