The detailed information of tRNA gene sequence


Sequence ID>W1610937642
Genome IDLUOY01000012
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S19_B12N3 [LUOY]
Start position on genome 5582
End posion on genome 5656
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caattcttgt
tRNA gene sequence 
GGGTTCGTAGCCTAGCCTGGTAGGGCGACGGTCTCCAAAACCGTCGATCGTCGGTTCAAA
TCCGATCGGGCCCACtt
Downstream region at tRNA end position 
acgttgtttt
Secondary structure (Cloverleaf model)
>W1610937642	Trp	CCA
                   t      ACtt acgttgtttt
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     A
    C       T C C G       G T C G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     CGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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