The detailed information of tRNA gene sequence


Sequence ID>W1610937692
Genome IDLUPA01000047
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S27_B13N2 [LUPA]
Start position on genome 281
End posion on genome 192
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaatcttcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGCTGAATGCACTGGTCTTGAAAACCAGCAAGGGCTAACACCCT
TCCAGGGTTCAAATCCCTGTCCCTCCACCA
Downstream region at tRNA end position 
cacaactctg
Secondary structure (Cloverleaf model)
>W1610937692	Ser	TGA
                   c      ACCA cacaactctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CAAGGGCTAACACCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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