The detailed information of tRNA gene sequence


Sequence ID>W1610937722
Genome IDLUPB01000055
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S31_B2 [LUPB]
Start position on genome 3972
End posion on genome 4043
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttcatt
tRNA gene sequence 
GGTGACGTGGCAGAGCGGTTATGCGTGAGCCTGCAAAGCTTATCTAAAGGGGTTCGACTC
CCCTCGTCACCTttc
Downstream region at tRNA end position 
tgcttttacg
Secondary structure (Cloverleaf model)
>W1610937722	Cys	GCA
                   t      Tttc tgcttttacg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T C
                    T     T C C C C     A
        G A        G      | | | | |     G
      C     G A C G       A G G G G     C
      G       | | |                 T T
      G     A T G C
        T T        G     TCTAA
                    T - A
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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