The detailed information of tRNA gene sequence


Sequence ID>W1610937752
Genome IDLUPD01000005
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S37_B6 [LUPD]
Start position on genome 12413
End posion on genome 12337
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatcatctT
tRNA gene sequence 
GGATCCGTCGTCTAGCCTGGTTTGGATGCTGCACTCACACTGCAGAGGTCAGGGGTTCAA
GTCCCCTCGGATCCATta
Downstream region at tRNA end position 
aataattcta
Secondary structure (Cloverleaf model)
>W1610937752	Val	CAC
                   T      ATta aataattcta
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A G G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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