The detailed information of tRNA gene sequence


Sequence ID>W1610937784
Genome IDLUPE01000047
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S43_B1 [LUPE]
Start position on genome 1323
End posion on genome 1249
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgtttaaaca
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGCCAAGCATATTGCCCTCTCAAGGCAGTGACTCGGGTTCAA
ATCCCGATGGGAGCAttc
Downstream region at tRNA end position 
tttaacaaaa
Secondary structure (Cloverleaf model)
>W1610937784	Glu	CTC
                   a      Attc tttaacaaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        A     TGAC
                    T + G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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