The detailed information of tRNA gene sequence


Sequence ID>W1610937795
Genome IDLUPE01000099
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S43_B1 [LUPE]
Start position on genome 3626
End posion on genome 3540
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcagtttga
tRNA gene sequence 
GCGGGGATCGCCTAGCCCGGTATGGCGTGGGATTGCTAATCCCATGTTCGCAAGAACTCG
GGGGTTCAAGTCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
gctttaatat
Secondary structure (Cloverleaf model)
>W1610937795	Ser	GCT
                   a      GCCA gctttaatat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    C         | | |                 T T
    G       T G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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