The detailed information of tRNA gene sequence


Sequence ID>W1610948488
Genome IDLVBI01000011
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetales bacterium Spiro_07 [LVBI]
Start position on genome 35069
End posion on genome 34980
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcagaattT
tRNA gene sequence 
GGAGTGGTGACCGAGAGGCCGAAGGTGGCTCCCTGCTAAGGAGTTATATCCCACAAGGAT
ATCGGGGGTTCGAATCCCCCCTGCTCCGTgc
Downstream region at tRNA end position 
agattacatc
Secondary structure (Cloverleaf model)
>W1610948488	Ser	GCT
                   T      GTgc agattacatc
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATATCCCACAAGGATATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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