The detailed information of tRNA gene sequence


Sequence ID>W1610948521
Genome IDLVBJ01000004
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetales bacterium Spiro_08 [LVBJ]
Start position on genome 10416
End posion on genome 10340
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaggcttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCTGCGGACTCATAATCCGTCGGTCCCTGGTTCAAG
TCCAGGTGGGCCCACTA
Downstream region at tRNA end position 
aacgggactg
Secondary structure (Cloverleaf model)
>W1610948521	Met	CAT
                   c      ACTA aacgggactg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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