The detailed information of tRNA gene sequence


Sequence ID>W1610948718
Genome IDLVBP01000260
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistales bacterium Syner_02 [LVBP]
Start position on genome 5817
End posion on genome 5720
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtctcggcgg
tRNA gene sequence 
GGAGGCGAATGTGTCCCGGTGGGCGCCCTGGACTTCAAATCCAGTGGGGGGCAGTATAGG
CTGTCTCCGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gttgtttgcc
Secondary structure (Cloverleaf model)
>W1610948718	SeC(p)	TCA
                   g      GCCA gttgtttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       T G T G       G T G G G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     TGGGGGGCAGTATAGGCTGTCTCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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