The detailed information of tRNA gene sequence


Sequence ID>W1610949368
Genome IDLVCQ01000096
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsiaceae bacterium NZ-RLO1 NZ-RLO [LVCQ]
Start position on genome 6156
End posion on genome 6245
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgagtcgct
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGTTCCCTGCTAAGGAACCGTATGCTAACGCGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cgttataatc
Secondary structure (Cloverleaf model)
>W1610949368	Ser	GCT
                   t      GCCA cgttataatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTATGCTAACGCGTACC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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