The detailed information of tRNA gene sequence


Sequence ID>WENV077699
Genome IDAAFX01090374
Search identical group
Phylum/ClassSoil microbial communities from Minnesota Farm
Species
Start position on genome 222
End posion on genome 316
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ttgcagcaga
tRNA gene sequence 
GGAAGAGAAGCGTCCCCGGTGGGGTGGCCGGACTTCAAACCCGGTGGGGGCCGTTGACGG
TCCTTTGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
tcgatgccgg
Secondary structure (Cloverleaf model)
>WENV077699	Sec	TCA
                   a      GCCA tcgatgccgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        G      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + + |                 T T
    T       G G T G
      G G          G     TGGGGGCCGTTGACGGTCCTTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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