The detailed information of tRNA gene sequence


Sequence ID>WENV078077
Genome IDAAFY01017195
Search identical group
Phylum/ClassFossil microbial community from Whale Fall (Santa Cruz Basin)
Species
Start position on genome 55
End posion on genome 146
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tactatattT
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCCAATGCGCACCACTCCAAATCGTGTTCTCGTTTGCGCGGG
ACCAGGGTTCCAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
Aaaaaccgca
Secondary structure (Cloverleaf model)
>WENV078077	Trp	CCA
                   T      GCCA Aaaaaccgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     C
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C C A        G     TTCTCGTTTGCGCGGGAC
                    C - G
                    A - T
                    C - G
                    C   C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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