The detailed information of tRNA gene sequence


Sequence ID>WENV078149
Genome IDAAFY01028121
Search identical group
Phylum/ClassFossil microbial community from Whale Fall (Santa Cruz Basin)
Species
Start position on genome 57
End posion on genome 148
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tactatattT
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCACGACTCGAAATCGTGTTCTCGTTTGCGCGGG
ACCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
Aaaaaccgca
Secondary structure (Cloverleaf model)
>WENV078149	Ser	CGA
                   T      GCCA Aaaaaccgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TTCTCGTTTGCGCGGGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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