The detailed information of tRNA gene sequence


Sequence ID>W1611056435
Genome IDMAQF01000029
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter aphrophilus [MAQF]
Start position on genome 54989
End posion on genome 55065
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcccccatac
tRNA gene sequence 
GCCCCCATAGCTCAGTCGGTCAGAGCAGTCGACTCATAATCGATTGGTCACAGGTTCAAG
TCCTGTTGGGGGCACCA
Downstream region at tRNA end position 
acttaataat
Secondary structure (Cloverleaf model)
>W1611056435	Met	CAT
                   c      ACCA acttaataat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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