The detailed information of tRNA gene sequence


Sequence ID>WENV078288
Genome IDAAFZ01021599
Search identical group
Phylum/ClassFossil microbial community from Whale Fall (Santa Cruz Basin)
Species
Start position on genome 486
End posion on genome 577
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccctgacgC
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCGGTGAGAGCCGA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
Cttacccaaa
Secondary structure (Cloverleaf model)
>WENV078288	Ser	CGA
                   C      GCCA Cttacccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCGGTGAGAGCCGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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