The detailed information of tRNA gene sequence


Sequence ID>W1611066539
Genome IDMBRE01000044
Search identical group
Phylum/ClassCyanobacteriota
SpeciesOscillatoriales cyanobacterium USR001 [MBRE]
Start position on genome 57842
End posion on genome 57769
Amino Acid Pseudo
Anticodon CAA
Upstream region at tRNA start position 
gattaatcaa
tRNA gene sequence 
ACTCCTGTAGCCCAATGGGAAGAGGCCGCAAGCTCAAACCTTGTGTTGTGTGAGTTCAAA
TCTCACCAGGAGTAgta
Downstream region at tRNA end position 
acgggatgtg
Secondary structure (Cloverleaf model)
>W1611066539	Pseudo	CAA
                   a      Agta acgggatgtg
                     A - T
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
      T A A        A      | | | | |     A
    G       C C C G       G T G A G     C
    G         | | |                 T T
    G       A G G C
      A A G        C     GTTGT
                    G + T
                    C - G
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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