The detailed information of tRNA gene sequence


Sequence ID>W1650000013
Genome IDAAZL01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus aeolicus Nankai-3 [AAZL]
Start position on genome 562444
End posion on genome 562356
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tctaagtcgt
tRNA gene sequence 
GGCACGGGGTGCTGTATCTGGTGATACAGGGCGGACTTCAGATCCGTCAAGTTCGATTGA
ACTCGGGGTTCGATTCCCCCCCGGTGCCGttt
Downstream region at tRNA end position 
tcgttttatt
Secondary structure (Cloverleaf model)
>W1650000013	SeC	TCA
                   t      Gttt tcgttttatt
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G   G
                     G - C
                     G - C          T T
                    G     C C C C C     A
    C T A T        T        | | | |     G
  T         G T C G       C G G G G     C
  G                                 T T
  G         A C A G
    T G A T        G     CAAGTTCGATTGAACT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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