The detailed information of tRNA gene sequence


Sequence ID>W1650013024
Genome IDLGTD01000426
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 2187
End posion on genome 2264
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aacaacttgt
tRNA gene sequence 
GCCCTTGTAGTATAGCCCGGTCTAGAATTCGGCCCTGTCACGGCTGAGACGCGTGTTCAA
ATCCCGCCGAGGGCGCCA
Downstream region at tRNA end position 
tcattttact
Secondary structure (Cloverleaf model)
>W1650013024	Asp	GTC
                   t      GCCA tcattttact
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | |   |     A
  C         T A T G       G C G T G     C
  G         +   | +                 T T
  G         G A A T
    T C T A        T     AGAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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