The detailed information of tRNA gene sequence


Sequence ID>W1630000123
Genome IDADCA01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [ADCA] FS406-22 [ADCA]
Start position on genome 39108
End posion on genome 39020
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctcattatgt
tRNA gene sequence 
GGCGCGGGGTACCGGGCTTGGTAGCCCGGGGCGGACTTCAGATCCGTCGAGGGCGAGAGC
CCTCGGGGTTCGATTCCCCCCCTGCGCCGtta
Downstream region at tRNA end position 
tattttttgt
Secondary structure (Cloverleaf model)
>W1630000123	SeC	TCA
                   t      Gtta tattttttgt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C
                     G - C          T T
                    G     C C C C C     A
    T C G G        T        | | | |     G
  T         G C C A       C G G G G     C
  G         |   |                   T T
  G         C C G G
    T A G C        G     CGAGGGCGAGAGCCCT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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