The detailed information of tRNA gene sequence


Sequence ID>W1630002228
Genome IDBBEF01000026
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri JCM 10043 [BBEF]
Start position on genome 34091
End posion on genome 34020
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
ttcacagatt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGTCACGCAATCGCCAGCAGAGCGATTCAGTCCTGGTTCAAATC
CGGACCTTGGCTtcg
Downstream region at tRNA end position 
tttaatttat
Secondary structure (Cloverleaf model)
>W1630002228	Pseudo	GCA
                   t      Ttcg tttaatttat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G        | + | |     A
      C     G G C G       C C T G G     C
      G       | | |                 T T
      G     A C G C
        T C        A     TCAGT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  A       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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