The detailed information of tRNA gene sequence


Sequence ID>W1630002231
Genome IDBBEF01000113
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri JCM 10043 [BBEF]
Start position on genome 164
End posion on genome 238
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaacaatat
tRNA gene sequence 
GGGCTCGTGGTCTAGACGGTTATGACGTCGCCTTCACACGGCGGAGGTCCTGGATTCGAA
TTCCAGCGGGCCCACtt
Downstream region at tRNA end position 
aattattctt
Secondary structure (Cloverleaf model)
>W1630002231	Val	CAC
                   t      ACtt aattattctt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C C T     A
      A G A        G      | | | | |     G
    C       T C T G       C T G G A     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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