The detailed information of tRNA gene sequence


Sequence ID>W1630002332
Genome IDBBFG01000083
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobium spinosum DSM 4136 = JCM 18804 [BBFG]
Start position on genome 25601
End posion on genome 25526
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
ctttcccctt
tRNA gene sequence 
GACCCCATCGTCTAATCAGCCAAGACCTTCGACTTTCTATCGAAGAATGCCGGTGCGAAT
CCGGCTGGGGTTGCCA
Downstream region at tRNA end position 
atttaccatc
Secondary structure (Cloverleaf model)
>W1630002332	Pseudo	TTC
                   t      GCCA atttaccatc
                     G + T
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T A A        C      | | | | |     G
    C       T C T G       G C C G G     C
    A       | | | |                 T G
    G       A G A C
      C C A        C     GAAT
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       T
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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