The detailed information of tRNA gene sequence


Sequence ID>W1630010121
Genome IDLDXL01000004
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon CSP1-1 [LDXL]
Start position on genome 198951
End posion on genome 199026
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttattttttt
tRNA gene sequence 
GGACTCGTTGCACAGTCTGGACAGTGCGGGCGGCTTCGGACCGCCAGGTCGAGGGATCGA
AGCCCTCCGAGCCCTCtt
Downstream region at tRNA end position 
atcaaaatga
Secondary structure (Cloverleaf model)
>W1630010121	Arg	TCG
                   t      TCtt atcaaaatga
                     G - C
                     G - C
                     A   C
                     C - G
                     T - A
                     C - G
                     G - C          G A
                    T     C T C C C     A
    C T G A        T      | | | | |     G
  T         C A C G       G A G G G     C
  G         | | | |                 A T
  G         G T G C
    A C A          G     AGGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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