The detailed information of tRNA gene sequence


Sequence ID>W1630010992
Genome IDLHXR01000059
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259I09 MSBL1 archaeon SCGC-AAA259I09 [LHXR]
Start position on genome 6465
End posion on genome 6387
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaccgttctT
tRNA gene sequence 
GGGCCTGTAGCTCAGTCACGGTAGAGCTCCCGTCTGATGTGCGGGCGGTCGTCGGTTCGA
ATCCGGCCAGGCCCATCC
Downstream region at tRNA end position 
gtagccccgt
Secondary structure (Cloverleaf model)
>W1630010992	Ile	GAT
                   T      ATCC gtagccccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | + | | |     G
  A         C T C G       G T C G G     C
  C         | | | |                 T T
  G         G A G C
    G T A          T     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       T
                  T       G
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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