The detailed information of tRNA gene sequence


Sequence ID>W1630000082
Genome IDABZB01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris palustris E1-9c [ABZB]
Start position on genome 158432
End posion on genome 158508
Amino Acid Pseudo
Anticodon GTC
Upstream region at tRNA start position 
aacaacaagT
tRNA gene sequence 
GCCCAGGTAGTGTAGTGGCCTATCATGATGCCCTGTCACGGCATCGACTCGGATTCGAAT
TCCGACCTGGGCGTCA
Downstream region at tRNA end position 
ctcaattttc
Secondary structure (Cloverleaf model)
>W1630000082	Pseudo	GTC
                   T      GTCA ctcaattttc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     A G C C T     A
      T G A        A      | | | | |     G
    G       T G T G       T C G G A     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    A - T
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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