The detailed information of tRNA gene sequence


Sequence ID>W1630000740
Genome IDASMP01000004
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon SCGC AAA011-D5 [ASMP]
Start position on genome 19684
End posion on genome 19754
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaacacag
tRNA gene sequence 
GGGTCTGTAGTTCACCGTCAGAATACCTGGCTCCAGCCCAGGAGAAAAGGGTTAAATTCC
CTTCAGACCCAttt
Downstream region at tRNA end position 
ttatatttat
Secondary structure (Cloverleaf model)
>W1630000740	Trp	CCA
                   g      Attt ttatatttat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T T
                    T     T T C C C     A
        C A        A      | | | | |     A
      C     C T T G       A A G G G     A
      G     | | | +                 T T
      T     G A A T
        C A        A     AGAA
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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