The detailed information of tRNA gene sequence


Sequence ID>W1630001000
Genome IDAWOG01000006
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon JGI OTU-1 [AWOG]
Start position on genome 39178
End posion on genome 39250
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gagatattat
tRNA gene sequence 
GCCTCAGTAGCTTAGTTAGTGGAGCATATCCTTGGTAAGGATAAGGTCGTGGGTGCAAGT
CCCATCTGAGGCTttc
Downstream region at tRNA end position 
tgcttaaatt
Secondary structure (Cloverleaf model)
>W1630001000	Thr	GGT
                   t      Tttc tgcttaaatt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       T T C G       G T G G G     C
    A       + | | |                 T G
    G       G A G C
      T G          A     AGGTC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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