The detailed information of tRNA gene sequence


Sequence ID>W1630001055
Genome IDAYGT01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon AB578-D14 [AYGT]
Start position on genome 1053
End posion on genome 981
Amino Acid Pseudo
Anticodon CTG
Upstream region at tRNA start position 
acatgtttac
tRNA gene sequence 
AGCCCCCTGGTGTAGTGGCCAATCATGAGAGGCCCTGGCCCTCTAGACCTAGGTTCGAAT
CCTGGGGGGGCTAtgt
Downstream region at tRNA end position 
gactgaggta
Secondary structure (Cloverleaf model)
>W1630001055	Pseudo	CTG
                   c      Atgt gactgaggta
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G          T A
                    T     G G T C C     A
      T G A        G      | + | | |     G
    G       T G T G       C T A G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     AGAC
                    A - T
                    G - C
                    A - T
                    G - C
                    G - C
                  C       C
                  C       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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