The detailed information of tRNA gene sequence


Sequence ID>W1630002063
Genome IDBBDK01000019
Search identical group
Phylum/ClassUnclassified
SpeciesAcidiplasma cupricumulans JCM 13668 [BBDK]
Start position on genome 9771
End posion on genome 9843
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
acagcaccta
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGTATCCTACCAGCTTGGGGTGTTGGTGACTCCGATTCAAAT
TCGGACGGCCCCAtta
Downstream region at tRNA end position 
atctctattt
Secondary structure (Cloverleaf model)
>W1630002063	Pseudo	GGG
                   a      Atta atctctattt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     A G G C T     A
      C G A        G      | | | | |     A
    T       T G G G       T C C G A     C
    T         | | +                 T T
    G       T C C T
      G T A        A     TGAC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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