The detailed information of tRNA gene sequence


Sequence ID>W1630010125
Genome IDLDXL01000007
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon CSP1-1 [LDXL]
Start position on genome 52388
End posion on genome 52314
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgtaggtcac
tRNA gene sequence 
GGGCCGATGGTCTAGCTTGGTTAGGATACTGCCTCGACACGGCAGTGGTCGAGAGTTCAA
ATCTCTCTCGGCCCAtct
Downstream region at tRNA end position 
ttatttaacc
Secondary structure (Cloverleaf model)
>W1630010125	Val	GAC
                   c      Atct ttatttaacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     A
  T         T C T G       G A G A G     C
  G         + | | +                 T T
  G         G G A T
    T T A          A     TGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  C       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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