The detailed information of tRNA gene sequence


Sequence ID>W1630010225
Genome IDLFEW01000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon casp-thauma1 [LFEW]
Start position on genome 60880
End posion on genome 60806
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcttcttgt
tRNA gene sequence 
GGGCCGGTAGTATAGCCTGGTAGTATACCCGCCTTGCACGCGGGGGGTCACGGATTCAAA
TTCCGTCCGGTCCACtt
Downstream region at tRNA end position 
tctattaccc
Secondary structure (Cloverleaf model)
>W1630010225	Ala	TGC
                   t      ACtt tctattaccc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C T     A
      C G A        A      | | | | |     A
    C       T A T G       A C G G A     C
    T       + | | +                 T T
    G       G T A T
      G T A        A     GGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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