The detailed information of tRNA gene sequence


Sequence ID>W1630010226
Genome IDLFEW01000022
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon casp-thauma1 [LFEW]
Start position on genome 4060
End posion on genome 4134
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
taacttcaat
tRNA gene sequence 
GGGTCTGTAGTCTAGCTGGTTAGGATACCGCGTCGACATCGCGGTGATCATGAGTTCGAA
TCTCATTAGACCCACtt
Downstream region at tRNA end position 
tttattattt
Secondary structure (Cloverleaf model)
>W1630010226	Val	GAC
                   t      ACtt tttattattt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          T A
                    T     T A C T C     A
      C G A        A      | | | | |     G
    T       T C T G       A T G A G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     TGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       T
                  C       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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