The detailed information of tRNA gene sequence


Sequence ID>W1630011048
Genome IDLIAL01000002
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL]
Start position on genome 20512
End posion on genome 20586
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtatttcgct
tRNA gene sequence 
GGGATCGTGGTCTAGCTTGGTATGATTCTGCGTTTGGGACGCAGAGGTCGCGAATTCGAA
TTTCGCCGGTCCCACtt
Downstream region at tRNA end position 
caaccattat
Secondary structure (Cloverleaf model)
>W1630011048	Pro	TGG
                   t      ACtt caaccattat
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T A
                    T     C G C T T     A
      C G A        G      | | | | |     G
    T       T C T G       G C G A A     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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