The detailed information of tRNA gene sequence


Sequence ID>W1630018190
Genome IDLUPE01000107
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopelagicus sp. REDSEA-S43_B1 [LUPE]
Start position on genome 2148
End posion on genome 2220
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gtcattactg
tRNA gene sequence 
GGGCCGATGGCTTAGGAGTATAGCGCCACGTTCGCAACGTGGATGTCGAGGGTGCGATTC
CCTCTCGGTCCACtt
Downstream region at tRNA end position 
ctcgaaagca
Secondary structure (Cloverleaf model)
>W1630018190	Ala	CGC
                   g      ACtt ctcgaaagca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C T C C C     A
        G A        G      | | | | |     G
      G     T T C G       G A G G G     C
      A       | | |                 T G
      G     T A G C
        T A        G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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