The detailed information of tRNA gene sequence


Sequence ID>WENV079968
Genome IDAATO01000038
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 10709
End posion on genome 10802
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccgtccta
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGGCATAAACC
TGCATCAAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
ggacaaacat
Secondary structure (Cloverleaf model)
>WENV079968	Ser	GCT
                   a      GCCA ggacaaacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATGCGGGCATAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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