The detailed information of tRNA gene sequence


Sequence ID>WENV080045
Genome IDAATO01002033
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 872
End posion on genome 794
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgacccattT
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCATCGGATTCATAACCCGAAGGTCGGCGGTTCAAG
TCCGCTCCTCGCTACTT
Downstream region at tRNA end position 
Tttctccccg
Secondary structure (Cloverleaf model)
>WENV080045	Met	CAT
                   T      ACTT Tttctccccg
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T C G C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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