The detailed information of tRNA gene sequence


Sequence ID>WENV080227
Genome IDAATO01013937
Search identical group
Phylum/ClassWastewater EBPR microbial communities from Bioreactor (USA sludge)
Species
Start position on genome 280
End posion on genome 204
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctgtttca
tRNA gene sequence 
GGGCCGTTAGCTCAGTCGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGGGGGTTCAAG
TCCCTCACGGCCCACCA
Downstream region at tRNA end position 
atcgcatcaa
Secondary structure (Cloverleaf model)
>WENV080227	Met	CAT
                   a      ACCA atcgcatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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