The detailed information of tRNA gene sequence


Sequence ID>WENV080247
Genome IDAAWO01000039
Search identical group
Phylum/ClassAcid Mine Drainage microbial communities from Richmond mine
Species
Start position on genome 4446
End posion on genome 4536
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caaacaaaaa
tRNA gene sequence 
GGAGGGGTGGCCGAGTCCGGTTTAAGGCTGCCGTCTCGAAAACGGTTGGCGCCAAAAGCG
TCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tgcttttgcc
Secondary structure (Cloverleaf model)
>WENV080247	Ser	CGA
                   a      GCCA tgcttttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T T A        T     TGGCGCCAAAAGCGTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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