The detailed information of tRNA gene sequence


Sequence ID>WENV080727
Genome IDABEF01000021
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 609
End posion on genome 685
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaggtgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAACCCCCGCAACCA
Downstream region at tRNA end position 
ccgccgtaac
Secondary structure (Cloverleaf model)
>WENV080727	Met	CAT
                   c      ACCA ccgccgtaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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