The detailed information of tRNA gene sequence


Sequence ID>WENV080728
Genome IDABEF01000027
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 104
End posion on genome 25
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tattgaaaaT
tRNA gene sequence 
CGAGGTGTAGCGTAGTCCGGTCAGCGCACCTGCTTTGGGAGCAGGGGGTCGCAGGTTCGA
ATCCTGCCACCTCGACTC
Downstream region at tRNA end position 
Gatagaaaca
Secondary structure (Cloverleaf model)
>WENV080728	Pro	TGG
                   T      ACTC Gatagaaaca
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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