The detailed information of tRNA gene sequence


Sequence ID>WENV080755
Genome IDABEF01001127
Search identical group
Phylum/ClassMarine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
Species
Start position on genome 377
End posion on genome 286
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatagaaacT
tRNA gene sequence 
GGAGAGTTGGGTGAGTGGCTGAAACCAGCTGGTTGCTAACTAGCCGTAGTTTAACGACTA
CCGAGAGTTCGAATCTCTCACTCTCCGCCA
Downstream region at tRNA end position 
Ttcttagtaa
Secondary structure (Cloverleaf model)
>WENV080755	Ser	GCT
                   T      GCCA Ttcttagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGTTTAACGACTACC
                    G - C
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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